miRBase entry: bdi-MIR5202

Stem-loop bdi-MIR5202


Accession
MI0018234
Description
Brachypodium distachyon bdi-MIR5202 precursor miRNA


Sequence

gucgacgauuuaacucacguaacauaaguuugaacucacaaaaaguauaucauuauguuacgugaguucaaacuuaugUUACGUGAGUUAAAUCGUCGAu
(((((((((((((((((((((((((((((((((((((((.....(((......))).....)))))))))))))))))))))))))))))))))))))))

Structure
                                       aaaaa   ua 
gucgacgauuuaacucacguaacauaaguuugaacucac     gua  u
|||||||||||||||||||||||||||||||||||||||     |||   
uAGCUGCUAAAUUGAGUGCAUUguauucaaacuugagug     uau  c
                                       cauug   ua 


Annotation confidence Not enough data
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Genome context
1: 28904144-28904243 [-]

Database links

Mature bdi-miR5202

Accession MIMAT0020759
Description Brachypodium distachyon bdi-miR5202 mature miRNA
Sequence 79 - UUACGUGAGUUAAAUCGUCGA - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19772667
    Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response
    Zhang J, Xu Y, Huan Q, Chong K
    BMC Genomics (2009) 10:449