miRBase entry: mtr-MIR5208a

Stem-loop mtr-MIR5208a


Accession
MI0018246
Description
Medicago truncatula mtr-MIR5208a precursor miRNA
Gene family
MIPF0001326; MIR5208


Sequence

uugaauacggucauauuagccauauuaguaggcauagguacuuugccguuuuaggcuauuAACAUGGAUGUUGUGAGUUUGUUcacag
.((((((.(.(((((.((.((((.(((((((.(...((((...))))......).))))))).)))).)).))))).).))))))...

Structure
--u      c g     u  g    a       g ---aua    c 
   ugaaua g ucaua ua ccau uuaguag c      ggua  
   |||||| | ||||| || |||| ||||||| |      |||| u
   acUUGU U AGUGU GU GGUA AAuuauc g      ccgu  
gac      U G     U  A    C       g auuuug    u 


Annotation confidence Not enough data
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Genome context
AC151525.18: 13620-13707 [+]

Database links

Mature mtr-miR5208a

Accession MIMAT0021139
Description Medicago truncatula mtr-miR5208a mature miRNA
Sequence 61 - AACAUGGAUGUUGUGAGUUUGUU - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010