Stem-loop sequence mtr-MIR2592ao

Accession

MI0018277 (change log)

Description

Medicago truncatula miR2592ao stem-loop

Gene family

MIPF0000815; MIR2592

Literature search

1 open access papers mention mtr-MIR2592ao
(2 sentences)

Stem-loop

   ---     u  caa    c   -a         -uuuu            ua         aa     c          ug    a   g 
5'    gugcu gg   aaug uug  guccuguug     caaguuugaauu  ucucauuca  gguaa acaauuguug  guug aau c
      ||||| ||   |||| |||  |||||||||     ||||||||||||  |||||||||  ||||| ||||||||||  |||| |||  
3'    uacga cu   uuau aac  caggacgac     guucaaacuuaa  gggguaggu  ucauu uguuaacaac  caac uua a
   uuc     -  agc    -   cc         uaacc            -c         -c     c          gu    c   c 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (JCVI_Mt3.5.2): chr5: 21742145-21742317 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0018277

Mature sequence mtr-miR2592ao

• Accession: MIMAT0021171
• Sequence: 11 - aaaugcuugaguccuguuguu - 31
• Evidence: experimental; Illumina [1]

References

1. PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).