miRBase entry: mtr-MIR5224a

Stem-loop mtr-MIR5224a


Accession
MI0018288
Description
Medicago truncatula mtr-MIR5224a precursor miRNA
Gene family
MIPF0001320; MIR5224


Sequence

caacguuacaaacguccgaucugggagcuuccucauauaccucaaucauguucacagcagcgugauuuggaagaggguugUCGAGGACAUGAGGGACGUUAUucucaaaagu
..........(((((((..((..(.....((((((((..(((((((((((((......))))))))).....))))..))).))))))..)).)))))))............

Structure
--caacguuaca       ga  ug gagcu     -   ua    -----         ca 
            aacgucc  uc  g     uccuc aua  ccuc     aaucauguu  c
            |||||||  ||  |     ||||| |||  ||||     |||||||||   
            UUGCAGG  AG  C     AGGAG Ugu  ggag     uuagugcga  a
ugaaaacucuUA       -G  UA -----     C   ug    aaggu         cg 


Annotation confidence Not enough data
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Genome context
chr6: 21060242-21060353 [+]

Database links

Mature mtr-miR5224a

Accession MIMAT0021182
Description Medicago truncatula mtr-miR5224a mature miRNA
Sequence 81 - UCGAGGACAUGAGGGACGUUAU - 102
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010