miRBase entry: mtr-MIR2592ar

Stem-loop mtr-MIR2592ar


Accession
MI0018295
Description
Medicago truncatula mtr-MIR2592ar precursor miRNA
Gene family
MIPF0000815; MIR2592

Literature search
1 open access papers mention mtr-MIR2592ar
(2 sentences)

Sequence

aauuuuugcuAGGCUGGUUUAGAUGAAGGUAuuaagugucaaggaauggaccucauuucguuggcacuugaauaccaucaucuaaagcaagccuaacaaaaau
.(((((((.(((((((.(((((((((.(((((((((((((((((((((.....)))))).)))))))))).))))).))))))))).).)))))).)))))))

Structure
a       c      - G         A     -          -      g 
 auuuuug uAGGCU G UUUAGAUGA GGUAu uaagugucaa ggaaug a
 ||||||| |||||| | ||||||||| ||||| |||||||||| |||||| c
 uaaaaac auccga c aaaucuacu ccaua guucacgguu cuuuac c
-       a      a g         a     a          g      u 


Annotation confidence Not enough data
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Genome context
chr3: 28692981-28693083 [-]

Database links

Mature mtr-miR2592ar

Accession MIMAT0021189
Description Medicago truncatula mtr-miR2592ar mature miRNA
Sequence 11 - AGGCUGGUUUAGAUGAAGGUA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010