Stem-loop sequence mtr-MIR2592ba

Accession

MI0018304 (change log)

Description

Medicago truncatula miR2592ba stem-loop

Gene family

MIPF0000815; MIR2592

Literature search

1 open access papers mention mtr-MIR2592ba
(2 sentences)

Stem-loop

           c        u                                u            u      c        -c  g        aa     -       g  -      a 
5' aaaccugc aaacaaca gacucgagcauuucgcucggcauucauguuuu ccuuugaaaaga uaaauu uuguuagg  ug uuuagaug  gguau uaggugu aa ggaaug a
   |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||  || ||||||||  ||||| ||||||| || |||||| c
3' uuuggacg uuuguugu cugaguucguaaagugggccguaaguacaaaa ggaaacuuuucu auuuaa aacaaucc  ac aaaucugc  ccaua guucacg uu cuuuac c
           u        c                                -            u      a        ac  g        ga     a       g  g      u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr5: 37815658-37815892 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0018304

Mature sequence mtr-miR2592ba

• Accession: MIMAT0021198
• Sequence: 77 - aggcugguuuagaugaaggua - 97
• Evidence: experimental; Illumina [1]

References

1. PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).