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miRBase |
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Stem-loop sequence mtr-MIR2592be |
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Accession | MI0018308 (change log) | |||||
Description | Medicago truncatula miR2592be stem-loop | |||||
Gene family | MIPF0000815; MIR2592 | |||||
Literature search |
1 open access papers mention mtr-MIR2592be | |||||
Stem-loop |
auaaa ---- - --- c ca a -ag u u u auc a - c a uc - - a u u c g - g a g -aaa a 5' aaguuuga uuccg ccaga agau gu uu guu gg aaug gcauuccaacuauaac auugucuuac ugaa uuggguaa uucaaa uugccaaacgaca g cucaa cauu cgccc acauucauguuuuuccu ugaaaaga uaaauu uuguua gcu g uuuagauga gguauu aagugu ggaaug a |||||||| ||||| ||||| |||| || || ||| || |||| |||||||||||||||| |||||||||| |||| |||||||| |||||| ||||||||||||| | ||||| |||| ||||| ||||||||||||||||| |||||||| |||||| |||||| ||| | ||||||||| |||||| |||||| |||||| c 3' uucaaacu ggggu ggucu ucug ua aa caa cc uuac cguaagguugauguug uaacagaaug acuu aacccauu aaguuu agcgguuuguugu c gaguu guaa gcggg uguaaguacaaaaagga acuuuucu auuuaa aacaau cga c aaaucuacu ccauaa uucacg cuuuac c -auug uaac a cau u ac - gaa - c u gaa - u a - cu c a c u u a a a g a g guug u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mtr-miR2592be |
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Accession | MIMAT0021202 |
Sequence |
170 - aggcugguuuagaugaaggua - 190 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:21571671
"Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis"
Plant Physiol. 156:1990-2010(2011).
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