Stem-loop mtr-MIR5241c

Accession

MI0018342

Description

Medicago truncatula mtr-MIR5241c precursor miRNA

Gene family

MIPF0001290; MIR5241

Literature search

1 open access papers mention mtr-MIR5241c
(1 sentences)

Sequence

guuaugcuaauggucuuccacuagcaauuaaaguauugggcucauuuuuguuuggucguaaugUGACUGAAUGGAAGAGUGCAUuggcuagauugagagaaaggccagauaacgaugu
(((((.((...((((((...((..(((((..(((..((.((((..(((((((((((((.....))))))))))))))))).))...))).)))))..)).))))))))))))).....

Structure

-----     g  aau      cca  ag     aa   -au  g    au             u 
     guuau cu   ggucuu   cu  caauu  agu   ug gcuc  uuuuguuuggucg a
     ||||| ||   ||||||   ||  |||||  |||   || ||||  ||||||||||||| a
     caaua ga   ccggaa   ga  guuag  ucg   AC UGAG  AAGGUAAGUCAGU u
uguag     -  ---      --a  ga     -a   guU  G    --             g 

Annotation confidence Not enough data

Genome context

chr6: 21075679-21075796 [-]

Mature mtr-miR5241c

• Accession: MIMAT0021237
• Description: Medicago truncatula mtr-miR5241c mature miRNA
• Sequence: 64 - UGACUGAAUGGAAGAGUGCAU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010