miRBase entry: mtr-MIR5262

Stem-loop mtr-MIR5262


Accession
MI0018366
Description
Medicago truncatula mtr-MIR5262 precursor miRNA


Sequence

uaaugugucugaaauugagucuauugacagauagcgaucauacuacacuuccuaUCUGUCAGUAGACUCAAUUUCagacacauua
((((((((((((((((((((((((((((((((((.((............))))))))))))))))))))))))))))))))))))

Structure
                                  c  ucaua 
uaaugugucugaaauugagucuauugacagauag ga     c
|||||||||||||||||||||||||||||||||| ||      
auuacacagaCUUUAACUCAGAUGACUGUCUauc cu     u
                                  -  ucaca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4: 37152484-37152568 [-]

Database links

Mature mtr-miR5262

Accession MIMAT0021262
Description Medicago truncatula mtr-miR5262 mature miRNA
Sequence 55 - UCUGUCAGUAGACUCAAUUUC - 75
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010

  2. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553