miRBase entry: mtr-MIR5267j

Stem-loop mtr-MIR5267j


Accession
MI0018388
Description
Medicago truncatula mtr-MIR5267j precursor miRNA
Gene family
MIPF0001276; MIR5267


Sequence

caaaucuuauAGGCAUUUGCUAGAAUACACCCACuuauuuuuuagaaugaguauuuuagcaagugaauaacuaaaaaaugguuca
.........((..(((((((((((((......((((((((....)))))))))))))))))))))..))((((.....))))...

Structure
-------caaaucuua  GG             ACACCC        u 
                uA  CAUUUGCUAGAAU      ACuuauuu u
                ||  |||||||||||||      ||||||||  
                au  gugaacgauuuua      ugaguaag u
acuugguaaaaaauca  aa             ------        a 


Annotation confidence Not enough data
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Genome context
chr2: 33205800-33205884 [-]

Database links

Mature mtr-miR5267j

Accession MIMAT0021285
Description Medicago truncatula mtr-miR5267j mature miRNA
Sequence 11 - AGGCAUUUGCUAGAAUACACCCAC - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010