Stem-loop mtr-MIR5270a

Accession

MI0018398

Description

Medicago truncatula mtr-MIR5270a precursor miRNA

Gene family

MIPF0001301; MIR5270

Sequence

uucuucguuuaucGAGGAGGAGUAGUUUUAGGUCAUUcuuuuguguggcguuugauuucgcgucuugucgacugauguauu
.....((((..((((.((((.((((((..(.(((((.(....).))))).)..))))..)).)))).))))..))))....

Structure

uucuu    ua    G    A  --    UU G     U u 
     cguu  ucGA GAGG GU  AGUU  A GUCAU c u
     ||||  |||| |||| ||  ||||  | ||||| |  
     guag  agcu uucu cg  uuag  u cggug g u
-uuau    uc    g    g  cu    uu g     u u 

Annotation confidence Not enough data

Genome context

chr1: 4812371-4812451 [+]

Mature mtr-miR5270a

• Accession: MIMAT0021295
• Description: Medicago truncatula mtr-miR5270a mature miRNA
• Sequence: 14 - GAGGAGGAGUAGUUUUAGGUCAUU - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010