miRBase entry: mtr-MIR5270b

Stem-loop mtr-MIR5270b


Accession
MI0018399
Description
Medicago truncatula mtr-MIR5270b precursor miRNA
Gene family
MIPF0001301; MIR5270


Sequence

uucuucguuuaucGAGGAGGAGUAGUUUUAGGUCAUUcuuuuguguggcguuugauuucgcgucuugucgacugauguauu
.....((((..((((.((((.((((((..(.(((((.(....).))))).)..))))..)).)))).))))..))))....

Structure
uucuu    ua    G    A  --    UU G     U u 
     cguu  ucGA GAGG GU  AGUU  A GUCAU c u
     ||||  |||| |||| ||  ||||  | ||||| |  
     guag  agcu uucu cg  uuag  u cggug g u
-uuau    uc    g    g  cu    uu g     u u 


Annotation confidence Not enough data
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Genome context
chr1: 4889821-4889901 [+]

Database links

Mature mtr-miR5270b

Accession MIMAT0021296
Description Medicago truncatula mtr-miR5270b mature miRNA
Sequence 14 - GAGGAGGAGUAGUUUUAGGUCAUU - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010