miRBase entry: mtr-MIR5271b

Stem-loop mtr-MIR5271b


Accession
MI0018401
Description
Medicago truncatula mtr-MIR5271b precursor miRNA
Gene family
MIPF0001281; MIR5271


Sequence

uucgguuCGGAUAAUUGUGGUUACUAACGGUucaguucgguuaaugaauuguuaucaaaauaaugguucgguucaagaauugguuaaaugguucaguuaauucugauacg
..((..(((((((((((.....((((.....(((((((......(((((((((((....)))))))))))......))))))).....)))).))))))..)))))..))

Structure
uu  gu     --      UGGUU    ACGGU       gguuaa           c 
  cg  uCGGA  UAAUUG     ACUA     ucaguuc      ugaauuguuau a
  ||  |||||  ||||||     ||||     |||||||      |||||||||||  
  gc  agucu  auugac     uggu     gguuaag      gcuugguaaua a
--  au     ua      ----u    aaauu       aacuug           a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4: 41545145-41545254 [-]

Database links

Mature mtr-miR5271b

Accession MIMAT0021298
Description Medicago truncatula mtr-miR5271b mature miRNA
Sequence 8 - CGGAUAAUUGUGGUUACUAACGGU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010