Stem-loop mtr-MIR5271e

Accession

MI0018404

Description

Medicago truncatula mtr-MIR5271e precursor miRNA

Gene family

MIPF0001281; MIR5271

Sequence

ugguucgguuCGGAUAAUUGUGGUUACUAACGGUucaguucgguuagugaguuguuaucaaaauaaugguucga
(((.((((((..((((((...(.((((((((.(.......).)))))))).).))))))..)))..))).))).

Structure

-   u   --   CG      UGU G        G Uu 
 ugg ucg  guu  GAUAAU   G UUACUAAC G  c
 ||| |||  |||  ||||||   | |||||||| |  a
 gcu ggu  uaa  cuauug   u agugauug c  g
a   u   aa   aa      --u g        g uu 

Annotation confidence Not enough data

Genome context

chr3: 33600877-33600950 [-]

Mature mtr-miR5271e

• Accession: MIMAT0021301
• Description: Medicago truncatula mtr-miR5271e mature miRNA
• Sequence: 11 - CGGAUAAUUGUGGUUACUAACGGU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010