Stem-loop mtr-MIR5272c

Accession

MI0018407

Description

Medicago truncatula mtr-MIR5272c precursor miRNA

Gene family

MIPF0001278; MIR5272

Sequence

uuggaaguGAAUUGAUUUAUGUUUGGAUACACuuuacuagaagugauucuuacgaauugauguuguuuggauag
((.(((....((((((((..((..((((.((((((....))))))))))..))))))))))....))).))...

Structure

---  g   guGA        AU  UU    A      a 
   uu gaa    AUUGAUUU  GU  GGAU CACuuu c
   || |||    ||||||||  ||  |||| ||||||  
   ag uuu    uaguuaag  ca  cuua gugaag u
gau  g   guug        --  uu    -      a 

Annotation confidence Not enough data

Genome context

chr5: 40796135-40796208 [-]

Mature mtr-miR5272c

• Accession: MIMAT0021304
• Description: Medicago truncatula mtr-miR5272c mature miRNA
• Sequence: 9 - GAAUUGAUUUAUGUUUGGAUACAC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010