Stem-loop mtr-MIR5276

Accession

MI0018417

Description

Medicago truncatula mtr-MIR5276 precursor miRNA

Sequence

aagcauauauAGGGGGAGCACCUUGCUGGGGCAUggcuggagcugguugggggucgcccagacacuccccaacaggcugcuccccccaaaucugcccca
..(((......(((((((((.((((.(((((..((.((((.((............)))))).))..))))).)))).)))))))))......)))....

Structure

--aa   uauauA         C    C     CA  g    a  ugguu 
    gca      GGGGGAGCA CUUG UGGGG  Ug cugg gc     g
    |||      ||||||||| |||| |||||  || |||| ||      
    cgu      cccccucgu ggac acccc  ac gacc cg     g
accc   cuaaac         c    a     uc  a    -  cuggg 

Annotation confidence Not enough data

Genome context

chr5: 21101295-21101393 [+]

Mature mtr-miR5276

• Accession: MIMAT0021314
• Description: Medicago truncatula mtr-miR5276 mature miRNA
• Sequence: 11 - AGGGGGAGCACCUUGCUGGGGCAU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010