Stem-loop mtr-MIR5284e

Accession

MI0018442

Description

Medicago truncatula mtr-MIR5284e precursor miRNA

Gene family

MIPF0001277; MIR5284

Sequence

gucccuguaauuuuagauuccuccacuuuuggucccucauuuuaugucccauguaugcaaauucugcuuacgugguggaauGAGGGACCAAAAGUGGAAGAAUCUgaaauuauggggac
((((((((((((((((((((.(((((((((((((((((((((((....(((((((.(((.....))).)))))))))))))))))))))))))))))).))))))))))))))))))))

Structure

                    c                       uguc       u   a 
gucccuguaauuuuagauuc uccacuuuuggucccucauuuua    ccaugua gca a
|||||||||||||||||||| |||||||||||||||||||||||    ||||||| ||| u
cagggguauuaaagUCUAAG AGGUGAAAACCAGGGAGuaaggu    ggugcau cgu u
                    A                       ----       u   c 

Annotation confidence Not enough data

Genome context

chr5: 17346989-17347107 [+]

Mature mtr-miR5284e

• Accession: MIMAT0021339
• Description: Medicago truncatula mtr-miR5284e mature miRNA
• Sequence: 82 - GAGGGACCAAAAGUGGAAGAAUCU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010