miRBase entry: mtr-MIR5295a

Stem-loop mtr-MIR5295a


Accession
MI0018466
Description
Medicago truncatula mtr-MIR5295a precursor miRNA
Gene family
MIPF0001287; MIR5295


Sequence

ucaguugguaguuuuggauuagugacagggccgucccuaagaauuuggaggcUCGGCUCUGGGAAUGAAAAGAGGCcagugauaaa
(((.(((((..((((...(((....((((((((.((((((....)))).))..))))))))....))).)))).))))))))....

Structure
----   g     ag    gga   guga        -u  -    g 
    uca uuggu  uuuu   uua    cagggccg  cc cuaa a
    ||| |||||  ||||   |||    ||||||||  || ||||  
    agu gacCG  AGAA   AGU    GUCUCGGC  gg gguu a
aaau   -     -G    --A   AAGG        Uc  a    u 


Annotation confidence Not enough data
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Genome context
chr3: 32422478-32422563 [+]

Database links

Mature mtr-miR5295a

Accession MIMAT0021363
Description Medicago truncatula mtr-miR5295a mature miRNA
Sequence 53 - UCGGCUCUGGGAAUGAAAAGAGGC - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010