Stem-loop mtr-MIR5295d

Accession

MI0018469

Description

Medicago truncatula mtr-MIR5295d precursor miRNA

Gene family

MIPF0001287; MIR5295

Sequence

ggcgauucaugccuaacauaacacaaucaucagggucguccuaagaauuuggaggcUCGGCUCUGGGAAUGAAAAGAGGCcagugaaaaa
.....(((((((((.........((.((.(((((((((.(((..(....)..)))..))))))))))).)).....))))..)))))...

Structure

ggcga     --    aacauaaca  a  a         -u   aa a 
     uucau  gccu         ca uc ucagggucg  ccu  g a
     |||||  ||||         || || |||||||||  |||  |  
     aagug  CGGA         GU AG GGUCUCGGC  gga  u u
--aaa     ac    ----GAAAA  A  -         Uc   gg u 

Annotation confidence Not enough data

Genome context

chr6: 15182884-15182973 [+]

Mature mtr-miR5295d

• Accession: MIMAT0021366
• Description: Medicago truncatula mtr-miR5295d mature miRNA
• Sequence: 57 - UCGGCUCUGGGAAUGAAAAGAGGC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010