miRBase entry: mtr-MIR5296

Stem-loop mtr-MIR5296


Accession
MI0018470
Description
Medicago truncatula mtr-MIR5296 precursor miRNA


Sequence

cucuugucacuaccucuuaaaaugcaauugacaauauuuggagaaacguguaaauaaaacaauuugcaucucagaAUUUUGUGUGGGUGUAAGAGGUGUauugccauaug
..........(((((((((..((.((....((((.((((.((((....(((((((......))))))))))).)))).)))).)).)).)))))))))............

Structure
--cucuugucac         aa  g  auug    u    g    aacg       aa 
            uaccucuua  au ca    acaa auuu gaga    uguaaau  a
            |||||||||  || ||    |||| |||| ||||    |||||||   
            GUGGAGAAU  UG GU    UGUU UAag cucu    acguuua  a
guauaccguuaU         -G  G  ---G    U    a    ----       ac 


Annotation confidence Not enough data
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Genome context
chr3: 41984534-41984643 [-]

Database links

Mature mtr-miR5296

Accession MIMAT0021367
Description Medicago truncatula mtr-miR5296 mature miRNA
Sequence 76 - AUUUUGUGUGGGUGUAAGAGGUGU - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010