Stem-loop sequence sly-MIR482a

Accession

MI0018482 (change log)

Previous IDs

sly-MIR482

Description

Solanum lycopersicum miR482a stem-loop

Gene family

MIPF0000403; MIR482

Literature search

22 open access papers mention sly-MIR482a
(255 sentences)

Stem-loop

         u          u    -            uu  uuuuuc 
5' cgaaaa cuauggggau ggug aguuggaaagcu  uc      u
   |||||| |||||||||| |||| ||||||||||||  ||      u
3' gcuuuu gguauccuua ccac uuaaccuuucga  ag      c
         u          c    c            uu  uguucu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (SL2.50; GCA_000188115.2): chr3: 64766256-64766347 [+]
• Overlapping transcripts:

  intergenic

Database links

• RNAcentral:URS000075A14E_4081
• miRBase Tracker:MI0018482

Mature sequence sly-miR482a

• Accession: MIMAT0020769
• Previous IDs: sly-miR482
• Sequence: 61 - uuuccaauuccacccauuccua - 82
• Evidence: experimental; Illumina [1]

References

1. PMID:21443685 "Profiling of short RNAs during fleshy fruit development reveals stage-specific sRNAome expression patterns" Mohorianu I, Schwach F, Jing R, Lopez-Gomollon S, Moxon S, Szittya G, Sorefan K, Moulton V, Dalmay T Plant J. 67:232-246(2011).
2. PMID:22307647 "MicroRNA regulation of plant innate immune receptors" Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B Proc Natl Acad Sci U S A. 109:1790-1795(2012).