Stem-loop isc-mir-5312

Accession

MI0018492

Description

Ixodes scapularis isc-mir-5312 precursor miRNA

Literature search

1 open access papers mention isc-mir-5312
(1 sentences)

Sequence

agcagagucauguugcacacagaUGGCUGAACGUUGUUAUGCGUgugacaugugaaagugcgcguaauaauguuccguuguuugugagcgacauugcguuguccca
.((((.((.(((((((.((((((((((.((((((((((((((((...((........)))))))))))))))))).)))))))))).))))))).)).))))....

Structure

---a    a  c       a          U                gug  aug 
    gcag gu auguugc cacagaUGGC GAACGUUGUUAUGCGU   ac   u
    |||| || ||||||| |||||||||| ||||||||||||||||   ||    
    uguu cg uacagcg guguuuguug cuuguaauaaugcgcg   ug   g
accc    g  u       a          c                ---  aaa 

Annotation confidence Not enough data

Genome context

DS900645: 19149-19254 [+]

Mature isc-miR-5312

• Accession: MIMAT0021383
• Description: Ixodes scapularis isc-miR-5312 mature miRNA
• Sequence: 24 - UGGCUGAACGUUGUUAUGCGU - 44
• Evidence: not_experimental

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328