Stem-loop rmi-mir-5316b

Accession

MI0018497

Description

Rhipicephalus microplus rmi-mir-5316b precursor miRNA

Gene family

MIPF0001364; mir-5316

Literature search

1 open access papers mention rmi-mir-5316b
(1 sentences)

Sequence

aguuugguaccacaugcaggcucgcgaaaauguucugauuggcauugauagaauaaauugUCACCGGGGCCUUUUCGACGAGcuuuccgugguuucucgucgcau
.....((.(((((....(((((((((((((.((((((..(((((..............))))).)))))).)))))).)))))))...))))).)).........

Structure

----aguuu  u     augc       -      u      au     uugaua 
         gg accac    aggcucg cgaaaa guucug  uggca      g
         || |||||    ||||||| |||||| ||||||  |||||       
         cu uggug    uucGAGC GCUUUU CGGGGC  ACUgu      a
uacgcugcu  u     -ccu       A      C      -C     uaaaua 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5316b

• Accession: MIMAT0021388
• Description: Rhipicephalus microplus rmi-miR-5316b mature miRNA
• Sequence: 61 - UCACCGGGGCCUUUUCGACGAG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328