miRBase entry: rmi-mir-5318

Stem-loop rmi-mir-5318


Accession
MI0018499
Description
Rhipicephalus microplus rmi-mir-5318 precursor miRNA

Literature search
1 open access papers mention rmi-mir-5318
(1 sentences)

Sequence

accuuauauagcccacaaacaaugccUUGUAUAACUGCAGAAGACUUUUCUCCgaagggccccaucucaguccugcuauaacacgaagaacauacacaaaacugauuaguuuguuuccgca
............................(((..((((.(((.(.((((((...))))))...).)))))))..))).......((..(((((.((.............)).))))).))..

Structure
-----------------accuuauauagcccacaaacaaugccUU   UA    C   A --A      U 
                                             GUA  ACUG AGA G   CUUUUC  
                                             |||  |||| ||| |   |||||| C
                                             cgu  ugac ucu c   gggaag  
acgccuuuguuugauuagucaaaacacauacaagaagcacaauau   cc    -   a ccc      C 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature rmi-miR-5318

Accession MIMAT0021390
Description Rhipicephalus microplus rmi-miR-5318 mature miRNA
Sequence 27 - UUGUAUAACUGCAGAAGACUUUUCUCC - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21699734
    Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
    Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
    BMC Genomics (2011) 12:328