Stem-loop rmi-mir-5317b

Accession

MI0018500

Description

Rhipicephalus microplus rmi-mir-5317b precursor miRNA

Sequence

auuguuauagcgcaagaucacaacgacgacaaagggacaagaagaagaugaaaggcgaaguagcgcucaucuuuuUCUUGUCCCUUUGUCGUCGUUCUgaucuugugcucuaacaaccgu
.((((((.((((((((((((.((((((((((((((((((((((((((((((...(((......))))))))))))))))))))))))))))))))).)))))))))))).))))))....

Structure

---a      u            c                              aag   aa 
    uuguua agcgcaagauca aacgacgacaaagggacaagaagaagauga   gcg  g
    |||||| |||||||||||| ||||||||||||||||||||||||||||||   |||   
    aacaau ucguguucuagU UUGCUGCUGUUUCCCUGUUCUuuuucuacu   cgc  u
ugcc      c            C                              ---   ga 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5317b

• Accession: MIMAT0021391
• Description: Rhipicephalus microplus rmi-miR-5317b mature miRNA
• Sequence: 76 - UCUUGUCCCUUUGUCGUCGUUCU - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328