miRBase entry: rmi-mir-5320

Stem-loop rmi-mir-5320


Accession
MI0018502
Description
Rhipicephalus microplus rmi-mir-5320 precursor miRNA


Sequence

guuuuuuagucgcugccauauauagcgacacaaagaauuuaauugagguauaugauaagacggcaauuccaugacuaaaggugcggguuuuccUGGAAGGAUCGUUUUUCGuaaaacuaaaccggaaaggauagca
(((((((.(((((((.......)))))))..)))))))........(((.(((((.(((((((...(((((.((..(((........))))).)))))...))))))))))))..)))...((.....))......

Structure
guuuuuuagucgcugccauauauagcgacacaaagaauuuaauuga   -a     u       caa     u  cu   ggu 
                                              ggu  uauga aagacgg   uucca ga  aaa   g
                                              |||  ||||| |||||||   ||||| ||  |||    
                                              uca  auGCU UUUUGCU   AAGGU cu  uuu   c
----------------------------acgauaggaaaggccaaa   aa     -       AGG     c  --   ggg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature rmi-miR-5320

Accession MIMAT0021393
Description Rhipicephalus microplus rmi-miR-5320 mature miRNA
Sequence 94 - UGGAAGGAUCGUUUUUCG - 111
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21699734
    Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
    Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
    BMC Genomics (2011) 12:328