Stem-loop rmi-mir-5326

Accession

MI0018508

Description

Rhipicephalus microplus rmi-mir-5326 precursor miRNA

Sequence

gguauaacccugucgugggaacugguuuuugugagcacuguucggaagaacuucaagaaaaaugggggcauUUGAACAGGCUUAGCAAACAAAUGACAauccgcuuugagacagcugugaca
(((...)))((((((((((...(.((((((((((((.(((((((((.(..(((((.......))))).).)))))))))))))).)))..)))).)...))))).....)))))........

Structure

gguauaacc     -----     aac g    --   -     a         a aa     ag 
         cuguc     guggg   u guuu  uug ugagc cuguucgga g  cuuca  a
         |||||     |||||   | ||||  ||| ||||| ||||||||| |  |||||  a
         gacag     cgccu   A UAAA  AAC AUUCG GACAAGUUu c  ggggu  a
-acaguguc     aguuu     aAC G    CA   G     -         a -g     aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5326

• Accession: MIMAT0021399
• Description: Rhipicephalus microplus rmi-miR-5326 mature miRNA
• Sequence: 72 - UUGAACAGGCUUAGCAAACAAAUGACA - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328