Stem-loop rmi-mir-5328

Accession

MI0018510

Description

Rhipicephalus microplus rmi-mir-5328 precursor miRNA

Sequence

caaagagugcugugaagccgaguUUAGAGGAGUCGAAGCAGCGUUGGCCugggacgccggcguuucagggcgcguugcuugcagcugcgacgcggcgugcaucgcaggcg
....(..(((.(((..((((.(((....(.(((.((((((((((.(.(((((((((....))))))))).)))))))))).).))).)))).))))...))).)))..).

Structure

caaa ag   u   -aa    a   UAGA G   C -         U G         c 
    g  ugc gug   gccg guU    G AGU G AAGCAGCGU G CCugggacg c
    |  ||| |||   |||| |||    | ||| | ||||||||| | |||||||||  
    c  acg uac   cggc cag    c ucg c uucguugcg c ggacuuugc g
---g gg   c   gug    g   ---- g   a g         - g         g 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5328

• Accession: MIMAT0021401
• Description: Rhipicephalus microplus rmi-miR-5328 mature miRNA
• Sequence: 24 - UUAGAGGAGUCGAAGCAGCGUUGGCC - 49
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328