Stem-loop osa-MIR5340

Accession

MI0018522

Description

Oryza sativa osa-MIR5340 precursor miRNA

Sequence

17 reads, 18 reads per million, 2 experiments

gaaaaugaaagucugaagauuuauucauaucaucaugaguaaauuauuuuacuugUGAUGACGUGGAUGAAUUUCAAAcguuuauuuu
.((((((((.((.(((.(((((((((((.((((((((((((((....)))))))))))))).)))))))))))))).)).))))))))

Structure

g        a  c   a           a              u 
 aaaaugaa gu uga gauuuauucau ucaucaugaguaaa u
 |||||||| || ||| ||||||||||| ||||||||||||||  
 uuuuauuu cA ACU UUAAGUAGGUG AGUAGUguucauuu a
-        g  A   -           C              u 

Annotation confidence Not enough data

Genome context

Chr2: 5683378-5683465 [-]

Mature osa-miR5340

• Accession: MIMAT0021413
• Description: Oryza sativa osa-miR5340 mature miRNA
• Sequence: 56 - UGAUGACGUGGAUGAAUUUCAAA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21791435
   Differential expression of the microRNAs in superior and inferior spikelets in rice (Oryza sativa)
   "Peng T, Lv Q, Zhang J, Li J, Du Y, Zhao Q"
   "J Exp Bot (2011) 62:4943-4954