miRBase entry: asu-mir-81b

Stem-loop asu-mir-81b


Accession
MI0018526
Description
Ascaris suum asu-mir-81b precursor miRNA


Sequence

uuguucucaaaACGGGUGUGCAUGCAGAUCAUGguguaauauagcucaUGAGAUCAUGCCACAUCUGUCUugaaagcca
..(((.((((.(((((((((((((.(..((((((.((......))))))))..))))).))))))))).)))).)))..

Structure
uu   c    a         -    C GA      u  aa 
  guu ucaa ACGGGUGUG CAUG A  UCAUGg gu  u
  ||| |||| ||||||||| |||| |  |||||| ||   
  cga aguU UGUCUACAC GUAC U  AGUacu cg  a
ac   a    C         C    - AG      -  au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature asu-miR-81b-5p

Accession MIMAT0021419
Description Ascaris suum asu-miR-81b-5p mature miRNA
Sequence 12 - ACGGGUGUGCAUGCAGAUCAUG - 33
Evidence experimental
Illumina [1]

Mature asu-miR-81b-3p

Accession MIMAT0021420
Description Ascaris suum asu-miR-81b-3p mature miRNA
Sequence 49 - UGAGAUCAUGCCACAUCUGUCU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21685128
    Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
    "Genome Res (2011) 21:1462-1477