Stem-loop asu-mir-81c

Accession

MI0018527

Description

Ascaris suum asu-mir-81c precursor miRNA

Sequence

gauuccgagGCGGAUGUGCAUGAGAUCAUGuaucuauaaaauuucaUGAGAUCAUGUUACAUCCGACUuggcgucuc
(((.(((((.(((((((((((((..(((((..............)))))..))))).)))))))).))))).)))..

Structure

--   u     G        -     GA     uaucua 
  gau ccgag CGGAUGUG CAUGA  UCAUG      u
  ||| ||||| |||||||| |||||  |||||       
  cug gguUC GCCUACAU GUACU  AGUac      a
cu   c     A        U     AG     uuuaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-81c-5p

• Accession: MIMAT0021421
• Description: Ascaris suum asu-miR-81c-5p mature miRNA
• Sequence: 10 - GCGGAUGUGCAUGAGAUCAUG - 30
• Evidence: experimental ; Illumina [1]

Mature asu-miR-81c-3p

• Accession: MIMAT0021422
• Description: Ascaris suum asu-miR-81c-3p mature miRNA
• Sequence: 47 - UGAGAUCAUGUUACAUCCGACU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477