miRBase entry: asu-mir-36b

Stem-loop asu-mir-36b


Accession
MI0018537
Description
Ascaris suum asu-mir-36b precursor miRNA


Sequence

guggccgauCGUGAGUGUUUGCGACGGUUAGCgucugguaucggugcUCACCGGGUGAACAUUCAUUAUcggcccauug
(.(((((((.((((((((((((..((((.((((.(((....))))))).)))).)))))))))))).))))))))....

Structure
---- u       C            GA    U    u   g 
    g ggccgau GUGAGUGUUUGC  CGGU AGCg cug u
    | ||||||| ||||||||||||  |||| |||| |||  
    c ccggcUA UACUUACAAGUG  GCCA Ucgu ggc a
guua -       U            -G    C    -   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature asu-miR-36b-5p

Accession MIMAT0021441
Description Ascaris suum asu-miR-36b-5p mature miRNA
Sequence 10 - CGUGAGUGUUUGCGACGGUUAGC - 32
Evidence experimental
Illumina [1]

Mature asu-miR-36b-3p

Accession MIMAT0021442
Description Ascaris suum asu-miR-36b-3p mature miRNA
Sequence 48 - UCACCGGGUGAACAUUCAUUAU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21685128
    Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
    "Genome Res (2011) 21:1462-1477