Stem-loop asu-mir-36c

Accession

MI0018538

Description

Ascaris suum asu-mir-36c precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

acgugaCGGGGAUUCUACUUUUGGUGAAGcgagcucagaugacuUCACCGGGCUCGAAUCCCUGUCcugucaugauuc
(((.(((((((((((....((((((((((((........)).))))))))))...))))))))))).)))........

Structure

--------   u           UACU          -  agc 
        acg gaCGGGGAUUC    UUUGGUGAAG cg   u
        ||| |||||||||||    |||||||||| ||    
        ugu CUGUCCCUAAG    GGGCCACUuc gu   c
cuuaguac   c           -CUC          a  aga 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-36c-5p

• Accession: MIMAT0021443
• Description: Ascaris suum asu-miR-36c-5p mature miRNA
• Sequence: 7 - CGGGGAUUCUACUUUUGGUGAAG - 29
• Evidence: experimental ; Illumina [1]

Mature asu-miR-36c-3p

• Accession: MIMAT0021444
• Description: Ascaris suum asu-miR-36c-3p mature miRNA
• Sequence: 45 - UCACCGGGCUCGAAUCCCUGUC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477