Stem-loop asu-mir-36d

Accession

MI0018539

Description

Ascaris suum asu-mir-36d precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

aucucgcguggCAGGGAUUCCGCUUUUGGUGACGuggagaagaaucuUCACCGGGCAAGAAUCCCUGUCauguugccu
.....(((((((((((((((.(((..((((((...(((......))))))))))))..))))))))))))))).....

Structure

aucuc               -C   UU      CGu   ga 
     gcguggCAGGGAUUC  GCU  UGGUGA   gga  a
     |||||||||||||||  |||  ||||||   |||   
     uguaCUGUCCCUAAG  CGG  GCCACU   ucu  g
uccgu               AA   --      ---   aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-36d-5p

• Accession: MIMAT0021445
• Description: Ascaris suum asu-miR-36d-5p mature miRNA
• Sequence: 12 - CAGGGAUUCCGCUUUUGGUGACG - 34
• Evidence: experimental ; Illumina [1]

Mature asu-miR-36d-3p

• Accession: MIMAT0021446
• Description: Ascaris suum asu-miR-36d-3p mature miRNA
• Sequence: 48 - UCACCGGGCAAGAAUCCCUGUC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477