Stem-loop asu-mir-43a

Accession

MI0018541

Description

Ascaris suum asu-mir-43a precursor miRNA

Sequence

cccggcGAUAGUAAGUACUGCGAUAUGcugcaagaacacaaacacaUAUCACAGUCUACUUGCUGUCUCcgguucgcug
.((((.((((((((((((((.((((((.((............)))))))).))))..)))))))))).)))).......

Structure

------c    c          --    C      c  caaga 
       ccgg GAUAGUAAGU  ACUG GAUAUG ug     a
       |||| ||||||||||  |||| |||||| ||      
       ggcC CUGUCGUUCA  UGAC CUAUac ac     c
gucgcuu    U          UC    A      -  aaaca 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-43a-5p

• Accession: MIMAT0021449
• Description: Ascaris suum asu-miR-43a-5p mature miRNA
• Sequence: 7 - GAUAGUAAGUACUGCGAUAUG - 27
• Evidence: experimental ; Illumina [1]

Mature asu-miR-43a-3p

• Accession: MIMAT0021450
• Description: Ascaris suum asu-miR-43a-3p mature miRNA
• Sequence: 47 - UAUCACAGUCUACUUGCUGUCUC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477