Stem-loop asu-mir-184

Accession

MI0018570

Description

Ascaris suum asu-mir-184 precursor miRNA

Sequence

ugauuuugagUGCUUAUCAGCUGCCAGCCCUGUugcaacuugaaacUGGACGGAAGACUGAUAAGAGCcucaauuuugccc
.((..(((((.(((((((((((.((..((..(((.........))).))..)).)).)))))..)))))))))..))....

Structure

---u  uu     U    --     -  G  AG  CU   gca 
    ga  uugag GCUU  AUCAG CU CC  CC  GUu   a
    ||  ||||| ||||  ||||| || ||  ||  |||   c
    uu  aacuc CGAG  UAGUC GA GG  GG  caa   u
cccg  uu     -    AA     A  A  CA  -U   agu 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-184-5p

• Accession: MIMAT0021501
• Description: Ascaris suum asu-miR-184-5p mature miRNA
• Sequence: 11 - UGCUUAUCAGCUGCCAGCCCUGU - 33
• Evidence: experimental ; Illumina [1]

Mature asu-miR-184-3p

• Accession: MIMAT0021502
• Description: Ascaris suum asu-miR-184-3p mature miRNA
• Sequence: 47 - UGGACGGAAGACUGAUAAGAGC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477