Stem-loop asu-mir-236

Accession

MI0018572

Description

Ascaris suum asu-mir-236 precursor miRNA

Gene family

MIPF0000232; mir-236

Sequence

uguugauuggcugucGUCCUACCUGCAAGUUAUUAGAgugaauaaugacgucUAAUACUGUCAGGUAAUGACGAcagcuugucc
....(((.((((((((((.((((((..(((.((((((((........)).)))))))))..))))))..)))))))))).))).

Structure

uguu   u          -C      CA   U      -  gaa 
    gau ggcugucGUC  UACCUG  AGU AUUAGA gu   u
    ||| ||||||||||  ||||||  ||| |||||| ||    
    cug ucgacAGCAG  AUGGAC  UCA UAAUcu ca   a
---c   u          UA      UG   -      g  gua 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-236-5p

• Accession: MIMAT0021505
• Description: Ascaris suum asu-miR-236-5p mature miRNA
• Sequence: 16 - GUCCUACCUGCAAGUUAUUAGA - 37
• Evidence: experimental ; Illumina [1]

Mature asu-miR-236-3p

• Accession: MIMAT0021506
• Description: Ascaris suum asu-miR-236-3p mature miRNA
• Sequence: 53 - UAAUACUGUCAGGUAAUGACGA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477