Stem-loop asu-mir-283

Accession

MI0018579

Description

Ascaris suum asu-mir-283 precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

cucaaggaGAAUAUCAGCAAGAUUGAUCUGGcuguauauaaguccAGACCUAUCUGUCGAUAUUGCCug
....(((..((((((.(((.(((.(.(((((((.......)).))))).).)))))).)))))).))).

Structure

cuca   aG      A   A   U A     -  gu 
    agg  AAUAUC GCA GAU G UCUGG cu  a
    |||  |||||| ||| ||| | ||||| ||  u
    uCC  UUAUAG UGU CUA C AGAcc ga  a
---g   -G      C   -   U C     u  au 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-283-5p

• Accession: MIMAT0021519
• Description: Ascaris suum asu-miR-283-5p mature miRNA
• Sequence: 9 - GAAUAUCAGCAAGAUUGAUCUGG - 31
• Evidence: experimental ; Illumina [1]

Mature asu-miR-283-3p

• Accession: MIMAT0021520
• Description: Ascaris suum asu-miR-283-3p mature miRNA
• Sequence: 46 - AGACCUAUCUGUCGAUAUUGCC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477