miRBase entry: asu-mir-67

Stem-loop asu-mir-67


Accession
MI0018581
Description
Ascaris suum asu-mir-67 precursor miRNA
Gene family
MIPF0000293; mir-67


Sequence

gggcacuuAGCUCGCUCGGCUGGUUGUUAGAUGuuucugauguucaUCACAACCUCCUUGAGUGAGUUGAaagcccuc
((((..(((((((((((((..((((((..((((...........))))))))))..).))))))))))))..))))..

Structure
--    ac            - CU      UA    uuuc 
  gggc  uuAGCUCGCUCG G  GGUUGU  GAUG    u
  ||||  |||||||||||| |  ||||||  ||||    g
  cccg  AGUUGAGUGAGU C  CCAACA  CUac    a
cu    aa            U CU      --    uugu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature asu-miR-67-5p

Accession MIMAT0021523
Description Ascaris suum asu-miR-67-5p mature miRNA
Sequence 9 - AGCUCGCUCGGCUGGUUGUUAGAUG - 33
Evidence experimental
Illumina [1]

Mature asu-miR-67-3p

Accession MIMAT0021524
Description Ascaris suum asu-miR-67-3p mature miRNA
Sequence 47 - UCACAACCUCCUUGAGUGAGUUGA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21685128
    Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
    "Genome Res (2011) 21:1462-1477