miRBase entry: asu-mir-375

Stem-loop asu-mir-375


Accession
MI0018582
Description
Ascaris suum asu-mir-375 precursor miRNA


Sequence

guuuucacucUUCGCAAGCGAACUGAUCAAAACccacacucggugacggacguUUUGUUCGUUUUGCUUGCGAUCAgugcgagcguac
((((.((((..(((((((((((.(((.((((((((.(((...)))..))..)))))).))).)))))))))))..)))).))))....

Structure
----    u    cU           C   U      --  -a   u 
    guuu cacu  UCGCAAGCGAA UGA CAAAAC  cc  cac  
    |||| ||||  ||||||||||| ||| ||||||  ||  ||| c
    cgag gugA  AGCGUUCGUUU GCU GUUUug  gg  gug  
caug    c    CU           U   U      ca  ca   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature asu-miR-375-5p

Accession MIMAT0021525
Description Ascaris suum asu-miR-375-5p mature miRNA
Sequence 11 - UUCGCAAGCGAACUGAUCAAAAC - 33
Evidence experimental
Illumina [1]

Mature asu-miR-375-3p

Accession MIMAT0021526
Description Ascaris suum asu-miR-375-3p mature miRNA
Sequence 54 - UUUGUUCGUUUUGCUUGCGAUCA - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21685128
    Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
    "Genome Res (2011) 21:1462-1477