miRBase entry: asu-mir-791

Stem-loop asu-mir-791


Accession
MI0018584
Description
Ascaris suum asu-mir-791 precursor miRNA


Sequence

gcuuguuggggugCUGGUCUGCUCCGUGUCCAAAGUuauguauagucacUUUGGCACUCUCCAGGCCUGCAcacuacagccuu
(((.((.((.((((.((((((....(((.(((((((.((.....)).))))))))))....)))))).)))).)))))))...

Structure
---   u  u  g    U      CUCC   U       u  g 
   gcu gu gg gugC GGUCUG    GUG CCAAAGU au u
   ||| || || |||| ||||||    ||| ||||||| || a
   cga ca uc cACG CCGGAC    CAC GGUUUca ug u
uuc   -  -  a    U      CUCU   -       c  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature asu-miR-791-5p

Accession MIMAT0021529
Description Ascaris suum asu-miR-791-5p mature miRNA
Sequence 14 - CUGGUCUGCUCCGUGUCCAAAGU - 36
Evidence experimental
Illumina [1]

Mature asu-miR-791-3p

Accession MIMAT0021530
Description Ascaris suum asu-miR-791-3p mature miRNA
Sequence 50 - UUUGGCACUCUCCAGGCCUGCA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21685128
    Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
    "Genome Res (2011) 21:1462-1477