miRBase entry: asu-mir-44b

Stem-loop asu-mir-44b


Accession
MI0018602
Description
Ascaris suum asu-mir-44b precursor miRNA


Sequence

aguaagcuACUGGAUGUGUGUCAUAGUCAUGacgugugaucaacaUGACUAGAUAUCACAUUCAGUGGuauauuu
.(((.(((((((((((((((((.((((((((..(......)..)))))))))))).))))))))))))).)))..

Structure
-a   a             -    A        ac ug 
  gua gcuACUGGAUGUG UGUC UAGUCAUG  g  u
  ||| ||||||||||||| |||| ||||||||  |   
  uau uGGUGACUUACAC AUAG AUCAGUac  c  g
uu   a             U    -        aa ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature asu-miR-44b-5p

Accession MIMAT0021564
Description Ascaris suum asu-miR-44b-5p mature miRNA
Sequence 9 - ACUGGAUGUGUGUCAUAGUCAUG - 31
Evidence experimental
Illumina [1]

Mature asu-miR-44b-3p

Accession MIMAT0021565
Description Ascaris suum asu-miR-44b-3p mature miRNA
Sequence 46 - UGACUAGAUAUCACAUUCAGUGG - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21685128
    Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
    "Genome Res (2011) 21:1462-1477