Stem-loop asu-mir-5356b

Accession

MI0018607

Description

Ascaris suum asu-mir-5356b precursor miRNA

Sequence

gcauuucuuuUCGUUCACCUCGGAAAUAGUGGAgaaaguaaaauuuuuaucUACUAUUUCCGAGGUGGAAGGGAagacgugc
((((.(((((((.((((((((((((((((((((.((((......)))).)))))))))))))))))))).))))))).))))

Structure

    u       G                    g    ua 
gcau ucuuuUC UUCACCUCGGAAAUAGUGGA aaag  a
|||| ||||||| |||||||||||||||||||| ||||   
cgug agaAGGG AGGUGGAGCCUUUAUCAUcu uuuu  a
    c       A                    a    ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-5356b-5p

• Accession: MIMAT0021574
• Description: Ascaris suum asu-miR-5356b-5p mature miRNA
• Sequence: 11 - UCGUUCACCUCGGAAAUAGUGGA - 33
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5356b-3p

• Accession: MIMAT0021575
• Description: Ascaris suum asu-miR-5356b-3p mature miRNA
• Sequence: 52 - UACUAUUUCCGAGGUGGAAGGGA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477