Stem-loop asu-mir-5357

Accession

MI0018608

Description

Ascaris suum asu-mir-5357 precursor miRNA

Sequence

ucgacuccuCACCCGAAUCGUUGUUCAUUUGuauugcuugccucaAAUGGACAACGAUUUGGGUGAGgaguugagcag
(((((((((((((((((((((((((((((((............)))))))))))))))))))))))))))))))....

Structure

----                               uauug 
    ucgacuccuCACCCGAAUCGUUGUUCAUUUG     c
    |||||||||||||||||||||||||||||||      
    aguugagGAGUGGGUUUAGCAACAGGUAAac     u
gacg                               uccgu 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-5357-5p

• Accession: MIMAT0021576
• Description: Ascaris suum asu-miR-5357-5p mature miRNA
• Sequence: 10 - CACCCGAAUCGUUGUUCAUUUG - 31
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5357-3p

• Accession: MIMAT0021577
• Description: Ascaris suum asu-miR-5357-3p mature miRNA
• Sequence: 46 - AAUGGACAACGAUUUGGGUGAG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477