Stem-loop asu-mir-5363

Accession

MI0018614

Description

Ascaris suum asu-mir-5363 precursor miRNA

Sequence

ucguacgcugAUGGGCAAAGUUUCUGAACCGUGUuguguucaaggcuaaACGGUUUGGCACUUGCCCAGCAcuguaugac
(((((((.((.(((((((.((..(((((((((...((.......))...))))))))).))))))))).)).))))))).

Structure

-       c  A       A  UU         GUu  gu 
 ucguacg ug UGGGCAA GU  CUGAACCGU   gu  u
 ||||||| || ||||||| ||  |||||||||   ||  c
 aguaugu AC ACCCGUU CA  GGUUUGGCA   cg  a
c       c  G       -  -C         aau  ga 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-5363-5p

• Accession: MIMAT0021588
• Description: Ascaris suum asu-miR-5363-5p mature miRNA
• Sequence: 11 - AUGGGCAAAGUUUCUGAACCGUGU - 34
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5363-3p

• Accession: MIMAT0021589
• Description: Ascaris suum asu-miR-5363-3p mature miRNA
• Sequence: 50 - ACGGUUUGGCACUUGCCCAGCA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477