miRBase entry: asu-mir-5364

Stem-loop asu-mir-5364


Accession
MI0018615
Description
Ascaris suum asu-mir-5364 precursor miRNA


Sequence

ugaacucAGCUAAUGGACUUUACUUCCUCUGCuuaauuuuucugcAGAGGUAUUGUUUAUUGGCUAAgaucaaagcucgagc
(((.((.(((((((((((..((...(((((((...........)))))))))..))))))))))).)).)))..........

Structure
----------   a  c           UU  CUU       uuaa 
          uga cu AGCUAAUGGAC  UA   CCUCUGC    u
          ||| || |||||||||||  ||   |||||||    u
          acu gA UCGGUUAUUUG  AU   GGAGAcg    u
cgagcucgaa   a  A           UU  ---       ucuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature asu-miR-5364-5p

Accession MIMAT0021590
Description Ascaris suum asu-miR-5364-5p mature miRNA
Sequence 8 - AGCUAAUGGACUUUACUUCCUCUGC - 32
Evidence experimental
Illumina [1]

Mature asu-miR-5364-3p

Accession MIMAT0021591
Description Ascaris suum asu-miR-5364-3p mature miRNA
Sequence 46 - AGAGGUAUUGUUUAUUGGCUAA - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21685128
    Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
    "Genome Res (2011) 21:1462-1477