miRBase entry: gma-MIR5371

Stem-loop gma-MIR5371


Accession
MI0018627
Description
Glycine max gma-MIR5371 precursor miRNA

Literature search
1 open access papers mention gma-MIR5371
(1 sentences)

Sequence

gggaggccccuaguccucgaauucUAGGAAUUAGUCACUCAGAUCcuaaccucuuugguucuuucauugagauccaugguugagucuacucguuccaagccuaauauggacugcaucgaagaggccaucgcgaaacuuaccuccaaucaacucaaccucaucgcugcaaagauguuaggaUCUCAGUGACUAAUUUCUAGAauuugaggacuagggaccuccc
((((((.((((((((((((((((((((((((((((((((.((((((((((.(((((((.((((.....)))).)).(((.((((....))))..)))((((......)).))(((.(((.((((...............................)))).))).)))))))).)))))))))).)))))))))))))))))))))))))))))))).))))))

Structure
      c                                C          c     gguucuuucauugagauccaugguugagucuacucguuccaagccuaauauggacu   u   a    ccaucgcgaaacuu 
gggagg cccuaguccucgaauucUAGGAAUUAGUCACU AGAUCcuaac ucuuu                                                        gca cga gagg              a
|||||| |||||||||||||||||||||||||||||||| |||||||||| |||||                                                        ||| ||| ||||              c
cccucc gggaucaggaguuuaAGAUCUUUAAUCAGUGA UCUaggauug agaaa                                                        cgu gcu cucc              c
      a                                C          u     --------------------------------------------------------   c   a    aacucaacuaaccu 


Annotation confidence Not enough data
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Genome context
chr15: 34072242-34072464 [+]

Database links

Mature gma-miR5371-5p

Accession MIMAT0021608
Description Glycine max gma-miR5371-5p mature miRNA
Sequence 25 - UAGGAAUUAGUCACUCAGAUC - 45
Evidence experimental
Illumina [1]

Mature gma-miR5371-3p

Accession MIMAT0021609
Description Glycine max gma-miR5371-3p mature miRNA
Sequence 181 - UCUCAGUGACUAAUUUCUAGA - 201
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21663675
    Identification of novel soybean microRNAs involved in abiotic and biotic stresses
    Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
    BMC Genomics (2011) 12:307