miRBase entry: gma-MIR5376

Stem-loop gma-MIR5376


Accession
MI0018635
Description
Glycine max gma-MIR5376 precursor miRNA
Gene family
MIPF0001304; MIR4998

Literature search
1 open access papers mention gma-MIR5376
(1 sentences)

Sequence

UGAAGAUUUGAAGAAUUUGGGAgaaggacgccgucaaggucgaggguuucgugacuacagcuucugaagcacgucaucuucacauaaauaagacgcguuucagaaguuguagucacgaaacucucgaccuagaccgcagcccuucucccaaauucuucaaaucuuca
(((((((((((((((((((((((((((.(((.(((.((((((((((((((((((((((((((((((((((.((((................)))).)))))))))))))))))))))))))))))))))).))).)).).)))))))))))))))))))))))))))

Structure
                           a -  c   a                                  a    aucuuca 
UGAAGAUUUGAAGAAUUUGGGAgaagg c gc guc aggucgaggguuucgugacuacagcuucugaagc cguc       c
||||||||||||||||||||||||||| | || ||| |||||||||||||||||||||||||||||||||| ||||        
acuucuaaacuucuuaaacccucuucc g cg cag uccagcucucaaagcacugauguugaagacuuug gcag       a
                           c a  c   a                                  c    aauaaau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gma-miR5376

Accession MIMAT0021617
Description Glycine max gma-miR5376 mature miRNA
Sequence 1 - UGAAGAUUUGAAGAAUUUGGGA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21663675
    Identification of novel soybean microRNAs involved in abiotic and biotic stresses
    Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
    BMC Genomics (2011) 12:307