miRBase entry: gma-MIR156o

Stem-loop gma-MIR156o


Accession
MI0018656
Description
Glycine max gma-MIR156o precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
40 open access papers mention gma-MIR156o
(164 sentences)

Sequence

aaaUUGACAGAAGAGAGUGAGCACaaagaggcacuugauauaaaucuauaucacugcuuuugugugcucacuacucuuucugucgguuuu
(((((((((((((((((((((((((.(((((((..(((((((....))))))).))))))).)))))))))).))).)))))))))))).

Structure
-            -   -          a       cu       a 
 aaaUUGACAGAA GAG AGUGAGCACa agaggca  ugauaua a
 |||||||||||| ||| |||||||||| |||||||  |||||||  
 uuuggcugucuu cuc ucacucgugu uuuucgu  acuauau u
u            u   a          g       -c       c 


Annotation confidence Not enough data
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Genome context
chr17: 37469976-37470065 [+]

Database links

Mature gma-miR156o

Accession MIMAT0021639
Description Glycine max gma-miR156o mature miRNA
Sequence 4 - UUGACAGAAGAGAGUGAGCAC - 24
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 21663675
    Identification of novel soybean microRNAs involved in abiotic and biotic stresses
    Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
    BMC Genomics (2011) 12:307

  2. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153