miRBase entry: gma-MIR166i

Stem-loop gma-MIR166i


Accession
MI0018660
Description
Glycine max gma-MIR166i precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
38 open access papers mention gma-MIR166i
(218 sentences)

Sequence

guugaggGGAAUGUCGUCUGGUUCGAGaccauucaugcaaguagucucagacaugacucuucugagugauuUCGGACCAGGCUUCAUUCCCCucagc
(((((((((((((..(((((((((((((.((((((.(.(((.((((........)))))))))))))).)))))))))))))..)))))))))))))

Structure
             UC             c      u c   u    uca 
guugaggGGAAUG  GUCUGGUUCGAGa cauuca g aag aguc   g
|||||||||||||  ||||||||||||| |||||| | ||| ||||    
cgacuCCCCUUAC  CGGACCAGGCUuu gugagu c uuc ucag   a
             UU             a      - -   -    uac 


Annotation confidence Not enough data
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Genome context
chr2: 14544488-14544584 [+]

Database links

Mature gma-miR166i-5p

Accession MIMAT0021645
Description Glycine max gma-miR166i-5p mature miRNA
Sequence 8 - GGAAUGUCGUCUGGUUCGAG - 27
Evidence experimental
Illumina [1]

Mature gma-miR166i-3p

Accession MIMAT0021646
Description Glycine max gma-miR166i-3p mature miRNA
Sequence 72 - UCGGACCAGGCUUCAUUCCCC - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21663675
    Identification of novel soybean microRNAs involved in abiotic and biotic stresses
    Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
    BMC Genomics (2011) 12:307