Stem-loop gma-MIR166i

Accession

MI0018660

Description

Glycine max gma-MIR166i precursor miRNA

Literature search

38 open access papers mention gma-MIR166i
(213 sentences)

Sequence

469929904 reads, 533599.0 reads per million, 178 experiments

guugaggGGAAUGUCGUCUGGUUCGAGAccauucaugcaaguagucucagacaugacucuucugagugauuUCGGACCAGGCUUCAUUCCCCUcagc
(((((((((((((..(((((((((((((.((((((.(.(((.((((........)))))))))))))).)))))))))))))..)))))))))))))

Structure

             UC             c      u c   u    uca 
guugaggGGAAUG  GUCUGGUUCGAGA cauuca g aag aguc   g
|||||||||||||  ||||||||||||| |||||| | ||| ||||    
cgacUCCCCUUAC  CGGACCAGGCUuu gugagu c uuc ucag   a
             UU             a      - -   -    uac 

Annotation confidence High

Genome context

chr2: 14544488-14544584 [+]

Mature gma-miR166i-5p

• Accession: MIMAT0021645
• Description: Glycine max gma-miR166i-5p mature miRNA
• Sequence: 8 - GGAAUGUCGUCUGGUUCGAGA - 28
• Evidence: experimental ; Illumina [1]

Mature gma-miR166i-3p

• Accession: MIMAT0021646
• Description: Glycine max gma-miR166i-3p mature miRNA
• Sequence: 72 - UCGGACCAGGCUUCAUUCCCCU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307